In the past decade alone, over 20 companies and 50 products have emerged for targeted and unbiased transcriptome and proteome profiling.

Our landscape helps audiences navigate this space by offering a clear view of these innovations, highlighting key differences and important dimensions to consider when comparing products between companies.

Product Database

Imaging Based
Sequencing Based
CyToF
DNA pixelation
In situ sequencing
Matrix Assisted Laser Desorption / Ionization (MALDI)
mIF
Multiplex FISH
Multiplexed Ion Beam Imaging
Multispectral Imaging (MSI)
Photo-activated barcoding
seqIF
Sequencing Based
Solid-phase capture
The instrument offers both NGS sequencing (like Illumina) and Imaging Based spatial technology
Cultured cells
Fixed frozen
Formalin-fixed paraffin-embedded (FFPE)
Fresh frozen
Frozen cells
Organoids
PFA fixed cells in solution
Tissue microarrays (TMAs)
No
Yes
Any species
Human
Insect
Marine
Mouse
Non-human primate
Plant
Rabbit
Rat
ATAC
Chromatin
Epigenetics
Genomic loci
Glycans
Lipids
miRNA
Other macromolecules
Protein
RNA
rRNA
Small molecules
VDJ
Precision Insight with Pre-defined Panels
Precision Insight with Pre-defined Panels or with user-conjugated antibodies
Unbiased Profiling
Single Technologies
Single Technologies logo

Spatial Sequencing

3-D Sequencing™

Single Technologies

Alpenglow
Alpenglow logo

Spatial Imaging

Aurora 3D Spatial Biology Solution

Alpenglow

Leica Microsystems
Leica Microsystems logo

Spatial Imaging

Cell DIVE

Leica Microsystems

Canopy
Canopy logo

Spatial Imaging

CellScape

Canopy

Lunaphore
Lunaphore logo

Spatial Imaging

COMET

Lunaphore

NanoString
NanoString logo

Spatial Imaging

CosMx

NanoString

Curio Biosciences
Curio Biosciences logo

Spatial Sequencing

CurioSeeker

Curio Biosciences

Curio Biosciences
Curio Biosciences logo

Spatial Sequencing

CurioTrekker

Curio Biosciences

10X Genomics
10X Genomics logo

Spatial Sequencing

CytAssist Spatial Gene and Protein Expression

10X Genomics

AtlasXOmics
AtlasXOmics logo

Spatial Sequencing

DBiT-seq

AtlasXOmics

AtlasXOmics
AtlasXOmics logo

Spatial Sequencing

FlowGel

AtlasXOmics

Singular Genomics
Singular Genomics logo

Spatial Sequencing

G4X™ Spatial Sequencer

Singular Genomics

Spatial Genomics
Spatial Genomics logo

Spatial Imaging

GenePS

Spatial Genomics

NanoString
NanoString logo

Spatial Sequencing

GeoMx

NanoString

Standard BioTools Inc.
Standard BioTools Inc. logo

Spatial Imaging

Hyperion XTi™ Imaging Systems

Standard BioTools Inc.

Ultivue (merged with Vizgen)
Ultivue (merged with Vizgen) logo

Spatial Imaging

InSituPlex®

Ultivue (merged with Vizgen)

Acuity Spatial (part of Bruker)
Acuity Spatial (part of Bruker) logo

Spatial Imaging

jebFISH™

Acuity Spatial (part of Bruker)

Leica Microsystems
Leica Microsystems logo

Spatial Imaging

Leica BOND RX

Leica Microsystems

DigitBio
DigitBio logo

Spatial Sequencing

Light-seq

DigitBio

Miltenyi Biotec
Miltenyi Biotec logo

Spatial Imaging

MACSima

Miltenyi Biotec

Bruker
Bruker logo

Spatial Imaging

MALDI HiPLEX-IHC

Bruker

Vizgen
Vizgen logo

Spatial Imaging

MERFISH Ultra

Vizgen

Ionpath
Ionpath logo

Spatial Imaging

MIBIscope

Ionpath

Syncell
Syncell logo

Spatial Imaging

Microscoop® Mint

Syncell

Resolve Biosciences
Resolve Biosciences logo

Spatial Imaging

Molecular Cartography

Resolve Biosciences

Pixelgen
Pixelgen logo

Spatial Sequencing

MPX

Pixelgen

RareCyte
RareCyte logo

Spatial Imaging

Orion™

RareCyte

Akoya Biosciences
Akoya Biosciences logo

Spatial Imaging

Phenocycler-Fusion

Akoya Biosciences

Akoya Biosciences
Akoya Biosciences logo

Spatial Imaging

Phenoimager

Akoya Biosciences

Stellaromics
Stellaromics logo

Spatial Imaging

Pyxa In Situ Analyzer

Stellaromics

RebusBio
RebusBio logo

Spatial Imaging

Rebus Esper™

RebusBio

Bio-Techne
Bio-Techne logo

Spatial Imaging

RNAscope

Bio-Techne

Leica Microsystems
Leica Microsystems logo

Spatial Imaging

SpectraPlex for STELLARIS

Leica Microsystems

Complete Genomics STOmics
Complete Genomics STOmics logo

Spatial Sequencing

Stereo-CITE Proteo-Transcriptomics

Complete Genomics STOmics

Complete Genomics STOmics
Complete Genomics STOmics logo

Spatial Sequencing

Stereo-seq OMNI

Complete Genomics STOmics

Complete Genomics STOmics
Complete Genomics STOmics logo

Spatial Sequencing

Stereo-seq Transcriptomics

Complete Genomics STOmics

Complete Genomics STOmics
Complete Genomics STOmics logo

Spatial Sequencing

Transcriptomics mIF

Complete Genomics STOmics

10X Genomics
10X Genomics logo

Spatial Sequencing

Visium HD Spatial Gene Expression

10X Genomics

10X Genomics
10X Genomics logo

Spatial Sequencing

Visium Spatial Gene Expression

10X Genomics

10X Genomics
10X Genomics logo

Spatial Sequencing

Visium Spatial Gene Expression for FFPE

10X Genomics

10X Genomics
10X Genomics logo

Spatial Imaging

Xenium In Situ Platform

10X Genomics